Dr. Ya-Ming Hou
Professor.
Thomas Jefferson University,
Department of Biochemistry and Molecular Biology
Phone: (215) 503-4480.
Email: Ya-Ming.Hou@jefferson.edu
Professor Ya-Ming Hou received her B. S. from National Taiwan University in Agricultural Chemistry, her M.A. From University of California, Berkeley in Biochemistry and Molecular Biology, and her Ph.D. From University of California, Berkeley in Comparative Biochemistry in the laboratory of Professor Sung-Hou Kim. She was a postdoc fellow with Professor Paul Schimmel at Massachusetts Institute of Technology and a visiting fellow with Professor Richard Giege at CNRS, Strasbourg, France. She joined the faculty of Department of Biochemistry and Molecular Biology at Thomas Jefferson University in 1992 and is now a tenured Full Professor.
Lab Members
Howard Gamper
PhD: Research Asst. Professor
I am interested in understanding both programmed and non-programmed tRNA frameshift on the ribosome at the molecular and kinetic levels.
Thomas Christian
MS: Senior Research Associate
thomas.christian@jefferson.edu
I am interested in understanding the molecular and structural mechanisms of tRNA methyltransferases. I would like to determine how specific methyltransferases recognize their tRNA targets and to explore strategies that these enzymes catalyze methyl transfer.
Isao Masuda
PhD: Research Instructor
I am interested in the mechanism of translational frameshifting, a non-standard phenomenon in decoding genetic codes into proteins. I am going to examine how the tRNAs and ribosomes are involved in frameshifting using both molecular biological and biochemical approaches.
Sunita Maharjen
PhD: Postdoctoral fellow
I am interested in mitochondrial biology associated with tRNA mutations and neurodegenerative disease.
Yuko Nakano
PhD: Postdoctoral fellow
I am interested in the diverse post-transcriptional epigenetic modifications on tRNAs and how they regulate codon-specific gene expression.
YUKa YaMAKI
PhD: Postdoctoral fellow
I am interested in the function of the post-transcriptional modifications in RNAs. I would like to clarify the interaction between molecules that changes depending on the presence or absence of modifications.
Ateesha Negi
Postdoc Fellow
I am interested in using Nanopore long-read sequencing to explore how the dynamic world of RNA modifications within the Transcriptomics of neuron cells impact human health and disease
HonGJuan GUO
PhD: Postdoctoral fellow
I am interested in post-transcriptional modifications of tRNA in human health and disease.
Henri McGuigan
BS: PhD student of Jefferson
I am interested in developing cell-permeable, potent, and selective inhibitors that target bacterial tRNA methyl transferases. I am interested in using these inhibitors to regulate tRNA-dependent gene expression.
ThomAs GrAnt
Research Technician, Master’s program of Cell and Developmental Biology at Jefferson
I am interested in the fundamental biology of tRNA and their post-transcriptional modifications.
ANA BASSLER
Research Technician
I am interested in pushing the frontier forward on direct RNA sequencing using the Nanopore technology.
LILY TAYAG
Undergraduate student, Honors Institute of Jefferson
I am interested in the epigenetic markers associated with autoimmune diseases and gene therapy’s potential for treatment of such disorders.
Tamanaa Atrafi
Jefferson MD student
I am interested in how neurological disorders change the cellular tRNA pool to re-program gene expression.
Sonal Lakhani
Pre-Medical Student
I am interested in the roles of tRNAs in decoding the genetic code.
Alexandra will
Summer Student (2022)
Alumni
Andrew Isopi (2023-2024) to a pharmaceutical company
Amir Dorsey (2021-2024) to U. Tennessee Medical School
LIndsay Adler (2023)
Miyu Enomoto (2022 ~ 2023, Tokyo Metropolitan University)
Nilay Yadav (2022)
Hiroya Tange, (2022, Japan)
Sitao Yin, (2021, Shanghai, China)
Yi-Lan Chen, (2021, Taiwan)
Summer Students
Summer, 2014
Angela Chang (University of Pennsylvania)
Albert Chang (Radnor High School)
Summer, 2013
Jacob Peacock (Harvey Mudd College)
David McGuigan III (McGill University)
Angela Chang (Radnor High School)
Albert Chang (Radnor High School)
Summer, 2012
Jacob R. Peacock (Harvey Mudd College)
Angela Y. Chang (Radnor High School)
Albert J. Chang (Radnor High School)
Summer, 2011
Angela Y. Chang (Radnor High School)
Aijingwen Li (Bryn Mawr College)
Hazal Yilmaz (Sabanci University, Turkey)
Lena Ma (Lehigh University)
Summer, 2010
Angela Chang (Radnor High School)
Lena Ma (Hallahan High School)
Summer, 2009
Lena Ma (Hallahan High School)
Suhavi Tucker (Haverford College)
Summer, 2008
Lena Ma (Hallahan High School)
Summer, 2007
Danielle Gunter-Ward (Delaware State University)
Summer, 2004
Lindsey Ingerman (Colgate University)
Summer, 2003
Lindsey Ingerman (Colgate U)
Summer, 2000
Melissa Shive (Chadwick High School)
Genessa Doring (UCLA)
Summer, 1999
Remyt Florentino (Lawrence High School)
Jesse Chang (Penn State U)
Summer, 1998
Remyt Florentino (Lawrence High School)
Elise Carpenter (Bryn Mawr College)
Jennifer Zruski (Bryn Mawr College)
Summer, 1997
Remyt Florentino (Lawrence High School)
Summer, 1996
Emily Chu (Yale U)
Collaborators
Barry Cooperman, U. Penn., Dynamics of tRNAs on ribosome.
Carol Deutsch, U. Penn., Protein Exit from ribosome exit tunnel.
Milana Frenkel-Morgenstern, Spanish National Cancer Research Center, tRNA levels in cells.
Ruben Gonzalez, Columbia University, Single molecule FRET on ribosome dynamics.
Anna Kashina, U. Penn., Arginyl-tRNA transferase.
Marisa Kozlowski, U. Penn., Synthesis of activated amino acids for tRNA aminoacylation.
Evgeny Nudler, New York Medical School, tRNA transcription.
Piera Pasinelli, Farber Institute of Neuroscience, Thomas Jefferson Univ., AARS and ALS.
James Petersson, U. Penn., Analogs of tRNA modification reactions.
Joseph Piccirilli, University of Chicago, RNA post-transcriptional modifications.
Joanna Sulkowska, University of Warsaw, Knotted protein folds.
Meni Wanunu, Northeastern University, Nano pore sequencing.
Wei Yang, Florida State University, Molecular simulatio and dynamics of protein-RNA complexes
Xiaolu Yang, U. Penn., tRNA-cytochrome c interaction.
Shigeyuki Yokoyama, Riken Research Institute, Japan, Structural analysis of tRNA modification enzymes.